AI decodes ancient zircons to reconstruct Earth's earliest continental crust
AI models decode zircon chemistry to infer vanished Hadean magmas and crust. Results point to felsic, TTG and granite-rich crust from crustal thickening, not deep subduction.

AI and ancient zircons reconstruct Earth's earliest crust chemistry
Four billion years ago, Earth's surface was volatile. Most rocks from that era were recycled or destroyed, leaving a gap in the record. Zircon crystals-tough, tiny, and datable to 4.4 billion years-are the exception. A team at Zhejiang University used machine learning to translate zircon chemistry into the compositions of the vanished rocks they grew from.
"We don't know what the actual rocks of the Hadean crust looked like, because we don't have any," said PhD student Denggang Lu. "But zircons give us a window into that unseen world."
How the study worked
Led by Professors Jia Liu and Qunke Xia, the team compiled the largest global dataset linking zircon chemistry to their host rocks: over 14,000 zircon samples paired with 823 rock samples. They trained supervised models to learn the relationships between zircon trace elements/isotopes and the major/trace elements of the parent magmas.
The models then predicted the chemistry of ancient magmas recorded by the Jack Hills detrital zircons (>4.3 Ga). Benchmarks showed the predictions track laboratory results for major and trace elements closely, enabling reconstructions where no physical rocks survive.
What the early crust looked like
The results point to a felsic, silica-rich crust dominated by tonalite-trondhjemite-granodiorite (TTG) and potassic granites-not classic andesite from deep subduction settings. Modelled parent magmas have SiOβ of 58-78 wt%, KβO/NaβO of 0.1-1.2, and Sr/Y of 1-103.
Petrogenesis indicates partial melting of mafic proto-crust produced these felsic magmas. Some melts formed TTGs; others-especially from K-rich sources-yielded granites. The most consistent tectonic context is crust thickened by major collisions at or near the surface rather than deep oceanic subduction.
Why this matters
Earth's oldest intact rocks are about 4.03 Ga, leaving a "missing chapter" before that. By decoding zircon records with AI, the team extends geochemical insight roughly 400 million years deeper into time. "The Hadean is a key period for the origin of Earth's continents," said Professor Liu. "Using machine learning here gives us a way to test how the earliest crust may have evolved."
The work supports scenarios where early plate interactions-or at least early expressions of them-operated in the Hadean. That recalibrates models for continental growth, heat flow, and early habitability.
Implications for research and practice
- Proxy-to-rock inversion: Zircon chemistry can quantitatively reconstruct lost lithologies and magmas, extending beyond dating into petrogenetic modeling.
- Broader applicability: The approach can be tested on other ancient terrains and proxies to fill gaps where rocks are sparse or altered.
- Tectonic tests: Predicted magma chemistries provide constraints to discriminate between deep subduction, crustal thickening, and impact-related melting scenarios.
"During a time of rapid AI development, using machine learning to discover the relationship between zircons and their rocks is simply exciting," said Professor Liu. "It provides us with a chance to push the known rock record back and examine how the earliest crust may have evolved."
What's next
More zircon data will refine the models and reduce uncertainty in inferred magma chemistries. Cross-checks with isotope systems, experimental petrology, and thermo-mechanical simulations will test the thickened-crust model and boundary conditions for early Earth tectonics.
The research is available via National Science Review. See the journal site for access details: National Science Review. For background on the Hadean eon, see Encyclopaedia Britannica.
Applying ML in your lab
- Build supervised models linking accessory mineral chemistry to whole-rock compositions where paired datasets exist.
- Quantify uncertainty, validate against independent samples, and document model transferability across terranes.
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